Install a DataSHIELD package from GitHub — dsadmin.install_github_package • opalr

Install a package from a DataSHIELD source repository on GitHub.

dsadmin.install_github_package(
  opal,
  pkg,
  username = "datashield",
  ref = "master",
  profile = NULL
)

Arguments

opal: Opal object or list of opal objects.
pkg: Package name.
username: GitHub username/organization of the git repository. Default is 'datashield'.
ref: Desired git reference (could be a commit, tag, or branch name). Default is 'master'.
profile: The DataSHIELD profile name to which operation applies. See also dsadmin.profiles.

Value

TRUE if installed

See also

Other DataSHIELD functions: dsadmin.get_methods(), dsadmin.get_method(), dsadmin.get_options(), dsadmin.install_local_package(), dsadmin.install_package(), dsadmin.installed_package(), dsadmin.package_descriptions(), dsadmin.package_description(), dsadmin.publish_package(), dsadmin.remove_package(), dsadmin.rm_methods(), dsadmin.rm_method(), dsadmin.rm_options(), dsadmin.rm_option(), dsadmin.rm_package_methods(), dsadmin.set_method(), dsadmin.set_option(), dsadmin.set_package_methods(), dsadmin.unpublish_package()

Examples

if (FALSE) {
o <- opal.login('administrator','password', url='https://opal-demo.obiba.org')
dsadmin.install_github_package(o, 'dsOmics', username='isglobal-brge')
opal.logout(o)
}