R/dictionary.annotations.R
dictionary.annotate.Rd
Apply or remove an annotation from a set of variables.
dictionary.annotate(
tibble,
variables = NULL,
taxonomy = "Mlstr_area",
vocabulary,
term
)
Tibble to be annotated.
A character vector of variable names to be annotated. If NULL or empty, all the columns of the tibble will be annotated.
The taxonomy to which the vocabulary belongs. If NULL, the annotation is a simple attribute (i.e. without a taxonomy reference).
The vocabulary to which the term belongs.
The term to apply. If NULL, the annotation will be deleted.
The annotated tibble
if (FALSE) {
o <- opal.login('administrator','password', url='https://opal-demo.obiba.org')
cqx <- opal.table_get(o, "CPTP", "Cag_coreqx")
cqx <- dictionary.annotate(cqx,
variables = c("A_SDC_EDU_LEVEL", "A_SDC_EDU_LEVEL_AGE"),
taxonomy = "Mlstr_area",
vocabulary = "Sociodemographic_economic_characteristics",
term = "Education")
opal.logout(o)
}